SPADE
Antimicrobial Peptide Analysis Tools
Antimicrobial Peptide Databases and Prediction Tools
APD (USA)
The original antimicrobial peptide database for anticancer, antibacterial, antifungal, antiviral, anti-HIV, antiparasitic, antidiabetic, wound healing peptides and beyond. (Country: USA, Published: 2004,2009,2016,2020,2022)
Access DatabaseDADP (Croatia)
Focuses on amphibian defense peptides, detailing structure-activity relationship data of skin secretory peptides to provide valuable information for related research.
Access DatabasePhytAMP (Canada/Tunisia)
A specialized database focusing on plant antimicrobial peptides, integrating signal peptide prediction tools to assist researchers in exploring plant defense mechanisms.
Access DatabaseARA-PEPs (Belgium)
As one of the largest repositories for plant sORFs-encoded peptides, it provides comprehensive peptide information and supports subcellular localization analysis to facilitate plant gene function research.
Access DatabaseBAGEL (Netherlands)
A web-based genomic mining tool for bacteriocins, capable of effectively identifying bacteriocin gene clusters and supporting CRISPR sequence recognition.
Access ToolCAMP (India)
Integrates multiple machine learning algorithms such as SVM and random forest, providing not only AMP activity prediction but also comprehensive database retrieval.
Access DatabaseDRAMP (China)
Contains antimicrobial peptides from various biological sources, providing detailed structural, functional, and activity data as an important reference for AMP research.
Access DatabaseDAMPD (formerly ANTIMIC)
Dragon database for antimicrobial sequences (Country: South Africa/Saudi Arabia, Published: 2004,2012)
Access DatabaseBACTIBASE
A data repository of bacteriocins (Country: Canada/Tunisie, Published: 2007,2010)
Access DatabaseCancerPPD/AntiCP 2.0
A database for anticancer peptides and proteins (Country: India, Published: 2014,2021)
Access DatabaseDBAASP
Database of AMPs with mainly synthetic peptides (Country: Georgia, Published: 2014,2016,2021)
Access DatabaseANTISTAPHYBASE
A database for anti-Staphylococcal peptides and essential oils (Country: France/Tunisia/Canada/USA, Published: 2016)
Access DatabaseLABiocin
Bacteriocins from Lactic Acid Bacteria (LAB) (Country: Lebanon/France/Morocco, Published: 2019)
Access DatabasePubMed (USA)
A biomedical and life sciences publication resource from the U.S. National Library of Medicine.
Access DatabaseUniProt (Europe)
UniProt knowledge base, compiling protein sequences and functional annotations.
Access DatabaseGoogle Scholar (USA)
Web-based search engine for academic literature across multiple disciplines.
Access DatabasePDB (RCSB Protein Data Bank) (USA)
Global authoritative database storing 3D structural data of biological macromolecules.
Access DatabasePeptaibols (England)
Database collecting peptaibols (fungal-derived peptides) (Published: 2003, 2004)
Access DatabaseAPD (USA)
Earliest comprehensive AMP database covering anti-cancer, antibacterial, anti-HIV peptides (Published: 2004, 2009, 2016, 2020, 2022)
Access DatabaseDAMPD (South Africa / Saudi Arabia)
Antimicrobial sequence database focusing on bacteriocins and related peptides (Published: 2004, 2012)
Access DatabaseCybase (Australia)
Database of cyclic proteins featuring AMPs with cyclic structures (Published: 2006, 2008)
Access DatabaseDefensins (Singapore)
Specialized knowledge base for defensins from plant, animal, and microbial sources (Published: 2007)
Access DatabaseBACTIBASE (Canada / Tunisia)
Bacteriocin repository collecting bacterial antimicrobial peptides and action mechanisms (Published: 2007, 2010)
Access DatabasePhytAMP (Canada / Tunisia)
Plant-derived AMP database focusing on plant immunity-related peptides (Published: 2009)
Access DatabaseCAMP (India)
AMP collection including patented and predicted peptides with activity data queries (Published: 2010, 2014, 2016, 2023)
Access DatabaseYADAMP (Italy)
Comprehensive AMP database supplementing peptide information missed by other resources (Published: 2012)
Access DatabaseDADP (Croatia)
Amphibian defense peptide database focusing on peptides from frogs and toads (Published: 2012)
Access DatabaseTHIOBASE (China)
Bacterial thiopeptide database featuring macrocyclic core-structured thiopeptide antibiotics (Published: 2012)
Access DatabaseEnzyBase (China)
Enzybiotic database including lysozymes, bacteriocins, and other enzymatic antimicrobial molecules (Published: 2012)
Access DatabaseLAMP (China)
Integrated AMP database linking multiple AMP resources with comprehensive search functions (Published: 2013, 2020)
Access DatabaseHIPdb (India)
Specialized database for HIV-inhibitory peptides with target information (Published: 2013)
Access DatabaseMilkAMP (Canada)
Milk-derived AMP database focusing on antimicrobial peptides in dairy products (Published: 2014)
Access DatabaseHemolytik (India)
Hemolytic peptide database with activity mechanisms (Published: 2014)
Access DatabaseParaPep (India)
Anti-parasitic peptide database covering peptides against malaria, flukes, etc. (Published: 2014)
Access DatabaseCancerPPD (India)
Anti-cancer peptide & protein database with tumor-inhibiting peptides (Published: 2014, 2021)
Access DatabaseDBAASP (Georgia)
Synthetic AMP database with artificially designed peptides and activity data (Published: 2014, 2016, 2021)
Access DatabaseBaAMPs (Italy)
Biofilm-active AMP database for peptides inhibiting bacterial biofilm formation (Published: 2015)
Access DatabaseANTISTAPHYBASE (France / Tunisia / Canada / USA)
Anti-staphylococcal peptide database with peptides and essential oils against Staphylococcus aureus (Published: 2016)
Access DatabaseSATPdb (India)
Therapeutic peptide database with AMPs for clinical applications (Published: 2016)
Access DatabaseDRAMP (China)
Antimicrobial peptide data warehouse with multi-source integration and sequence analysis tools (Published: 2016, 2019, 2022)
Access DatabaseInverPep (Colombia)
Invertebrate AMP database with peptides from insects, crustaceans, etc. (Published: 2017)
Access DatabaseMBPDB (Denmark)
Milk bioactive peptide database with antibacterial and immunomodulatory peptides (Published: 2017)
Access DatabaseAntiTbPdb (India)
Anti-tuberculosis peptide database targeting Mycobacterium tuberculosis (Published: 2018)
Access DatabaseLABiocin (Lebanon / France / Morocco)
Lactic acid bacteria bacteriocin database with application scenarios (Published: 2019)
Access DatabasePlantAFP (India / Czech Republic)
Plant antifungal peptide database with antifungal AMPs (Published: 2019)
Access DatabaseADAPTABLE (France)
AMP sequence merging platform with multi-database alignment tools (Published: 2019)
Access DatabaseFoldamerDB (Hungary)
Peptide foldamer database with artificial AMP-mimicking structures (Published: 2020)
Access DatabaseACD (India)
Antimicrobial chemotherapy database integrating peptide-drug combination data (Published: 2020)
Access DatabaseAntiCP 2.0 (India)
Upgraded anti-cancer peptide database with apoptosis-inducing peptides (Published: 2020)
Access DatabaseFermFooDb (India)
Fermented food bioactive peptide database from fermentation processes (Published: 2021)
Access DatabaseB-AMP (India / UK / USA)
Biofilm-specific AMP database targeting bacterial biofilms (Published: 2021)
Access DatabaseSuPepMem (Spain / Portugal)
Immunopeptide MD simulation database for innate immunity AMPs (Published: 2022)
Access DatabaseACovPepDB (China)
Anti-coronavirus peptide database for COVID-19 and other coronaviruses (Published: 2022)
Access DatabaseAMPDB v1 (India)
Basic AMP database (Version 1) with sequence and physicochemical properties (Published: 2023)
Access DatabaseDRAVP (China)
Antiviral peptide database for influenza, HIV, and other viruses (Published: 2023)
Access DatabaseGtoPdb (UK / France)
Guide to Pharmacology database for AMP-receptor interaction and drug target data (Published: 2023)
Access DatabaseaSynPEP-DB (Spain / Germany / Poland)
ESKAPE bacteriophage-derived AMP database against drug-resistant bacteria (Published: 2023)
Access DatabaseESKtides (China)
Bacteriophage-derived AMP database for ESKAPE drug-resistant bacteria (Published: 2024)
Access DatabaseAbAMPdb (India)
Anti-Acinetobacter baumannii peptide database for multidrug-resistant strains (Published: 2024)
Access DatabaseAVR/I/SSAPDB (India)
Anti-resistant Staphylococcus peptide database for VRSA, VISA, VSSA (Published: 2024)
Access DatabaseAPD peptide predictor (USA)
AMP classification & prediction tool based on APD database with sequence activity scoring (Published: 2004)
Access ToolBAGLE (Netherlands)
Bacteriocin genomic mining tool for predicting bacteriocin-encoding genes (Published: 2006)
Access ToolAntiBP (India)
Machine learning-based AMP predictor supporting SVM, QM, and ANN models (Published: 2007)
Access ToolAMPer (Canada)
Automated gene-encoded AMP discovery tool via genomic analysis for potential peptide regions
Access ToolData Sources and References
Database information integrated on this page is compiled from the APS Database of the United Nations Medical College (https://aps.unmc.edu/links) and related literatures.
References:
- Wang, G. (2017) Antimicrobial Peptides: Discovery, Design and Novel Therapeutic Strategies. CABI.
- Haug, B. E., & Svendsen, J. S. (2007). Antimicrobial peptides: discovery, design and therapeutic potential. Current Pharmaceutical Design, 13(28), 2878-2895.
- Fjell, C. D., Hiss, J. A., Hancock, R. E., & Schneider, G. (2012). Designing antimicrobial peptides: a quantitative structure-activity relationship approach. Nature Reviews Drug Discovery, 11(1), 37-51.
- Other references are detailed on the original UNMC APS page.
Disclaimer: External links are for reference only and do not represent this site's endorsement of their content or services. All copyrights of databases and tools belong to their original creators. In case of intellectual property disputes, please contact the site administrator to remove relevant content.